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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Tifrunner_x_GT-C20_b
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG1
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_viral
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Tifrunner_x_GT-C20_b [ View Map Set Info ]
Map Name: LG1
Map Start: 0 cM
Map Stop: 55.8 cM
Features by Type:
2 QTL_viral
13 SSR
15 Total

Map Features

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Items 1 to 15 of 15.
peanut - TT_Tifrunner_x_GT-C20_b - LG1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GNB100 SSR 0 No other positions
GNB76 SSR 5.6 No other positions
GM2084 SSR 8.4 peanut - TT_AhComposite_SujayGowda2012_a - AhIV GM2084 SSR 52.031 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 GM2084 SSR 8.09 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIV GM2084 SSR 87.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A10 GM2084 SSR 57.939 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 GM2084 SSR 21.271 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIV GM2084 SSR 116.2 (cM) Automated name-based, Automated name-based View Maps
Ah2AC3F07-2 SSR 10.1 No other positions
GNB320-2 SSR 11.7 No other positions
GNB629 SSR 13.2 No other positions
TSWV 2-1 QTL_viral 13.2 - 14.7 No other positions
Ah3TC31G11-1 SSR 14.7 No other positions
GA161 SSR 16.9 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A10 GA161 SSR 88.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A10 GM692 SSR 50.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A10 GM692 SSR 64.911 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GA161 SSR 77.88 (cM) Automated name-based, Automated name-based View Maps
TSWV 2-2 QTL_viral 16.9 - 23.9 No other positions
Ah2TC7H11-2 SSR 19.9 peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 TC7H11-2 SSR 82.25 (cM) Automated name-based, Automated name-based View Maps
GNB154 SSR 23.9 No other positions
Ah3TC31G11-2 SSR 50.5 No other positions
GNB817-1 SSR 55.6 No other positions
GM2411 SSR 55.8 peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM2411 SSR 57.61 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A10 GM2411 SSR 68.836 (cM) Automated name-based, Automated name-based View Maps