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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_Tifrunner_x_GT-C20_b
(Reference Set)
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Correspondences
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Maps LG6
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_fungal
SSR
TRAP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Tifrunner_x_GT-C20_b [ View Map Set Info ]
Map Name: LG6
Map Start: 0 cM
Map Stop: 124.2 cM
Features by Type:
1 QTL_fungal
26 SSR
1 TRAP
28 Total

Map Features

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Items 1 to 25 of 28.       of 2 | Next
peanut - TT_Tifrunner_x_GT-C20_b - LG6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHS1943 SSR 0 No other positions
AS1RN17F12 SSR 6.5 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA01 RN17F12 SSR 100.185 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA01 RN17F12 SSR 62.983 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A01 RN17F12 SSR 85 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A01 RN17F12 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A01 RN17F12 SSR 116.928 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 RN17F12 SSR 52.82 (cM) Automated name-based, Automated name-based View Maps
Ah1TC3H02 SSR 10.7 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA01 TC3H02 SSR 82.19 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 TC3H02 SSR 62.27 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A01 TC3H02 SSR 108.894 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A01 TC3H02 SSR 32.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A01 TC3H02 SSR 19.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A01 GM38 SSR 76.347 (cM) Automated name-based, Automated name-based View Maps
Ah3TC27H12 SSR 16.5 peanut - AA_A.duranensis_x_A.stenosperma_d - A01 TC27H12 SSR 67.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB01 TC27H12 SSR 38.665 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 Ah3TC27H12 SSR 69.14 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA01 TC27H12 SSR 47.333 (cM) Automated name-based, Automated name-based View Maps
Ah3TC30D04 SSR 22.6 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A01 TC30D04 SSR 93.525 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA01 TC30D04 SSR 57.029 (cM) Automated name-based, Automated name-based View Maps
GNB374-1 SSR 40.6 No other positions
GA42-3 SSR 45.9 No other positions
Ah3TC16A10-1 SSR 52.7 No other positions
Ah3 SSR 53.7 peanut - TT_VG9514_x_TAG24_a - A01 Ah3 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhI Ah3 SSR 53.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A01 Ah3 SSR 8.1 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB01 Ah3 SSR 11.658 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhI Ah3 SSR 36 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 Ah3 SSR 95.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG01 Ah3 SSR 150.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 Ah3 SSR 53.371 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 Ah3 SSR 131.47 (cM) Automated name-based, Automated name-based View Maps
Ah3TC16A10-2 SSR 53.9 No other positions
Ah3TC23F04 SSR 62.8 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 TC23F04 SSR 26.869 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A10 TC23F04 SSR 44.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 TC23F04 SSR 8.389 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 Ah3TC23F04 SSR 47.4 (cM) Automated name-based, Automated name-based View Maps
Ah3TC23C08-2 SSR 64.1 No other positions
Ah2TC7H02 SSR 66.4 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 TC7H02 SSR 75.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A09 Leg467 SSR 143.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 TC7H02 SSR 62.53 (cM) Automated name-based, Automated name-based View Maps
pPGSseq13A7 SSR 69.1 No other positions
GNB41-2 SSR 70.2 No other positions
GNB837 SSR 74 No other positions
AHGS0108 SSR 75.2 No other positions
GA42-1 SSR 75.2 No other positions
Ah1TC1A08 SSR 77.1 peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 TC1A08 SSR 132.43 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A06 TC1A08 SSR 68.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A02 TC1A08 SSR 50.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 TC1A08 SSR 30.735 (cM) Automated name-based, Automated name-based View Maps
GNB652-2 SSR 79 No other positions
GNB619 SSR 80.6 No other positions
Late and Early leaf spot 1-7 QTL_fungal 80.6 - 83.9 No other positions
GM2724 SSR 83.9 peanut - TT_VG9514_x_TAG24_a - B01 GM2724 SSR 9.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhI GM2724 SSR 178.21 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhI GM2724 SSR 71.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 GM2724.A01 SSR 67.77 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A01 GM2724 SSR 58.753 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 GM2724.B01 SSR 0 (cM) Automated name-based, Automated name-based View Maps
AHGS0138 SSR 86.1 No other positions
GA7x10AF TRAP 101 No other positions