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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Tifrunner_x_GT-C20_b
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_fungal
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Tifrunner_x_GT-C20_b [ View Map Set Info ]
Map Name: LG8
Map Start: 0 cM
Map Stop: 68.7 cM
Features by Type:
1 QTL_fungal
13 SSR
14 Total

Map Features

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Items 1 to 14 of 14.
peanut - TT_Tifrunner_x_GT-C20_b - LG8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1843 SSR 0 peanut - AA_A.duranensis_x_A.duranensis_a - A05 GM1843 SSR 73.21 (cM) Automated name-based, Automated name-based View Maps
PM50 SSR 10.5 peanut - TT_AhComposite_SujayGowda2012_a - AhIV PM50 SSR 15.542 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 PM50 SSR 103.31 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - B05 PM50 SSR 30.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIV PM50 SSR 18.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 PM50 SSR 76.321 (cM) Automated name-based, Automated name-based View Maps
PM308 SSR 13.6 No other positions
PM36 SSR 26.1 peanut - BB_A.ipaensis_x_A.magna_b - B05 PM36 SSR 55.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 PM36.A05 SSR 160.26 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 PM36 SSR 8.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIV PM36 SSR 57.9 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB05 PM36 SSR 16.848 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - B05 PM36 SSR 62.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A05 PM36 SSR 100.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 PM36.B05 SSR 59.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIV PM36 SSR 25.515 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV PM36 SSR 184.7 (cM) Automated name-based, Automated name-based View Maps
Late and Early leaf spot 1-8 QTL_fungal 26.1 - 29.2 No other positions
GM2137 SSR 29.2 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 GM2137 SSR 29.823 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 GM2137 SSR 7.62 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A05 GM2137 SSR 69.081 (cM) Automated name-based, Automated name-based View Maps
Ai119F10 SSR 34.6 No other positions
Ah1TC5D01 SSR 39.3 No other positions
IPAHM73 SSR 41.4 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 IPAHM73 SSR 34.033 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 IPAHM73 SSR 9.83 (cM) Automated name-based, Automated name-based View Maps
GNB901-1 SSR 50.1 No other positions
AHGS0729 SSR 53 No other positions
pPGSseq19D6 SSR 56.8 peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 seq19D6 SSR 35.6 (cM) Automated name-based, Automated name-based View Maps
GA147-1 SSR 66 No other positions
GM1555-1 SSR 68.7 No other positions