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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_VG9514_x_TAG24_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B05
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL_insect
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_VG9514_x_TAG24_a [ View Map Set Info ]
Map Name: B05
Map Start: 0 cM
Map Stop: 99.4 cM
Features by Type:
1 QTL_insect
7 SSR
1 Marker
5 transposon
14 Total

Map Features

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Items 1 to 14 of 14.
peanut - TT_VG9514_x_TAG24_a - B05
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RGC24 Marker 0 No other positions
PM183 SSR 16.1 peanut - TT_TG26_x_GPBD4_b - LG03 PM183 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIV PM183 SSR 14.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhIV PM183 SSR 57.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG04 PM183 SSR 23.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIV PM183 SSR 57.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIV PM183 SSR 10.791 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 PM183 SSR 116.68 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 PM183 SSR 72.685 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIV PM183 SSR 8.3 (cM) Automated name-based, Automated name-based View Maps
PM50 SSR 30.6 peanut - TT_Tifrunner_x_GT-C20_b - LG8 PM50 SSR 10.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIV PM50 SSR 18.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIV PM50 SSR 15.542 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 PM50 SSR 76.321 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 PM50 SSR 103.31 (cM) Automated name-based, Automated name-based View Maps
TE0119 transposon 33.8 No other positions
TE0323 transposon 44.8 No other positions
gi30420446 SSR 47.3 No other positions
Groundnut bruchid antibiosis 1-7 QTL_insect 55.6 - 56.4 No other positions
SSR_GO342880 SSR 56.4 No other positions
PM36 SSR 62.6 peanut - TT_TG26_x_GPBD4_a - AhIV PM36 SSR 57.9 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB05 PM36 SSR 16.848 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIV PM36 SSR 25.515 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 PM36_c1 SSR 54.894 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 PM36.A05 SSR 160.26 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B05 PM36_c2 SSR 49.56 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B05 PM36 SSR 55.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 PM36 SSR 8.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A05 PM36 SSR 100.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG8 PM36 SSR 26.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV PM36 SSR 184.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 PM36.B05 SSR 59.2 (cM) Automated name-based, Automated name-based View Maps
IPAHM287 SSR 71.3 peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 IPAHM287.B01 SSR 239.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhIV IPAHM287 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhI IPAHM287 SSR 26.131 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 IPAHM287.B05 SSR 15.82 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 IPAHM287.A01 SSR 150.74 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhI IPAHM287 SSR 20.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG04 IPAHM287 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIV IPAHM287 SSR 0 (cM) Automated name-based, Automated name-based View Maps
TE0045 transposon 84.1 No other positions
TE0319 transposon 94.6 No other positions
EM31 SSR 96.8 No other positions
TE0446 transposon 99.4 No other positions