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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_VG9514_x_TAG24_a
(Reference Set)
Min.
Correspondences
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Maps B08
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_insect
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_VG9514_x_TAG24_a [ View Map Set Info ]
Map Name: B08
Map Start: 0 cM
Map Stop: 161.4 cM
Features by Type:
1 QTL_insect
12 SSR
13 Total

Map Features

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Items 1 to 13 of 13.
peanut - TT_VG9514_x_TAG24_a - B08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ARS796 SSR 0 No other positions
Groundnut bruchid antibiosis 1-14 QTL_insect 16.6 - 17.4 No other positions
SSR_HO115593 SSR 29.7 No other positions
S31 SSR 34 No other positions
pPGPseq_4E08 SSR 56.8 No other positions
PM375 SSR 107 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 PM375 SSR 51.613 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 PM375 SSR 15.58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVII PM375 SSR 7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVII PM375 SSR 7 (cM) Automated name-based, Automated name-based View Maps
SSR_DX510322 SSR 138.8 No other positions
TC20B05 SSR 147 peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 TC20B05 SSR 61.76 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC20B05 SSR 105 (cM) Automated name-based, Automated name-based View Maps
IPAHM407 SSR 149.9 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 IPAHM407 SSR 109.51 (cM) Automated name-based, Automated name-based View Maps
IPAHM171 SSR 151.2 peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI IPAHM171 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI IPAHM171 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 IPAHM171.B08 SSR 110.19 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 IPAHM171.A06 SSR 3.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 IPAHM171 SSR 44.104 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 IPAHM171.B01 SSR 31.41 (cM) Automated name-based, Automated name-based View Maps
IPAHM229 SSR 157 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 IPAHM229.B08 SSR 71.56 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII IPAHM229 SSR 64.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII IPAHM229 SSR 64.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 IPAHM229.A08 SSR 93.11 (cM) Automated name-based, Automated name-based View Maps
IPAHM219 SSR 158.5 peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 IPAHM219.B04 SSR 20 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII IPAHM219 SSR 62.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII IPAHM219 SSR 62.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 IPAHM219.B08 SSR 103.66 (cM) Automated name-based, Automated name-based View Maps
GM1986 SSR 161.4 peanut - TT_Tifrunner_x_GT-C20_b - LG4 GM1986 SSR 34.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A07 GM1986.A07 SSR 154.52 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 GM1986.B08 SSR 108.92 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII GM1986 SSR 24.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII GM1986 SSR 13.441 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVIII GM1986 SSR 10.9 (cM) Automated name-based, Automated name-based View Maps