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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_VG9514_x_TAG24_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_VG9514_x_TAG24_a [ View Map Set Info ]
Map Name: B10
Map Start: 0 cM
Map Stop: 102.2 cM
Features by Type:
10 SSR
2 transposon
12 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
peanut - TT_VG9514_x_TAG24_a - B10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
IPAHM176 SSR 0 peanut - TT_TAG24_x_GPBD4_a - AhXII IPAHM176 SSR 1.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXII IPAHM176 SSR 3.232 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 IPAHM176 SSR 77.687 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG05 IPAHM176 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXII IPAHM176 SSR 9.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 IPAHM176 SSR 22.45 (cM) Automated name-based, Automated name-based View Maps
IPAHM531 SSR 4.7 peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 IPAHM531.B10 SSR 53.48 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXII IPAHM531 SSR 26.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 IPAHM531.A01 SSR 124.54 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXII IPAHM531 SSR 12.22 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG05 IPAHM531 SSR 17.7 (cM) Automated name-based, Automated name-based View Maps
SSR_DX511078 SSR 16.1 No other positions
TE0359 transposon 25.6 No other positions
TE0162 transposon 31 No other positions
IPAHM23 SSR 32.3 peanut - TT_AhComposite_SujayGowda2012_a - AhXII IPAHM23 SSR 20.982 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG13 IPAHM23 SSR 29 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 IPAHM23.B10 SSR 75.45 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG5 IPAHM23 SSR 36 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 IPAHM23.A09 SSR 83.86 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXII IPAHM23 SSR 44.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 IPAHM23 SSR 60.026 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIII IPAHM23 SSR 97.26 (cM) Automated name-based, Automated name-based View Maps
gi42560331 SSR 33.2 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIII PM675 SSR 96.26 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 PM675 SSR 23.335 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 PM675 SSR 63.857 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXII PM675 SSR 39.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXII PM675 SSR 24.626 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 PM675.A09 SSR 82.86 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXII PM675 SSR 45.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG13 PM675 SSR 28 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 PM675.B10 SSR 70.35 (cM) Automated name-based, Automated name-based View Maps
EE16 SSR 56.7 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 EE16 SSR 97.725 (cM) Automated name-based, Automated name-based View Maps
GM1742 SSR 61.8 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 GM1742 SSR 38.688 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 GM1742 SSR 118.73 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG5 GM1742 SSR 63.9 (cM) Automated name-based, Automated name-based View Maps
IPAHM475 SSR 70.9 peanut - TT_TG26_x_GPBD4_b - LG01 IPAHM475 SSR 145.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXII IPAHM475 SSR 42.503 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 IPAHM475 SSR 121.43 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 IPAHM475 SSR 32.905 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXII IPAHM475 SSR 74.2 (cM) Automated name-based, Automated name-based View Maps
GM2032 SSR 84.3 peanut - TT_TG26_x_GPBD4_a - AhXII GM2032 SSR 95.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIV GM2032 SSR 271.97 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 GM2032 SSR 24.303 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 GM2032 SSR 142.53 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A10 GM2032 SSR 110.208 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG5 GM2032 SSR 70.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXII GM2032 SSR 51.744 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG04 GM2032 SSR 30.4 (cM) Automated name-based, Automated name-based View Maps
GM1483 SSR 102.2 peanut - TT_ICGS44_x_ICGS76_a - LG04 GM1483 SSR 51.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIX GM1483 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIX GM1483 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A01 GM1483 SSR 46.576 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 GM1483.B10 SSR 155.89 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIX GM1483 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B09 GM1483.B09 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIV GM1483 SSR 293.37 (cM) Automated name-based, Automated name-based View Maps