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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AhCookUCDavisRGHHyb2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps FPC_Contig224
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
fpc_marker
GenomicClone_ActiveFinishing
GenomicClone_Finished
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AhCookUCDavisRGHHyb2 [ View Map Set Info ]
Map Name: FPC_Contig224
Map Start: 0 cM
Map Stop: 1,316 cM
Features by Type:
18 Clone
10 GenomicClone_ActiveFinishing
31 GenomicClone_Finished
1 SSR
12 fpc_marker
72 Total

Map Features

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Items 1 to 25 of 72.       of 3 | Next
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig224
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AR011O18 Clone 468 - 561 No other positions
AR006I03 GenomicClone_Finished 955 - 1,051 No other positions
AR011K01 GenomicClone_ActiveFinishing 969 - 1,051 No other positions
AR009M20 GenomicClone_Finished 1,016 - 1,142 No other positions
AR005A09 Clone 944 - 1,051 No other positions
AR006A08 GenomicClone_Finished 636 - 736 No other positions
AR008C19 Clone 0 - 71 No other positions
AR003L04 Clone 505 - 542 No other positions
AR004F02 GenomicClone_Finished 965 - 1,051 No other positions
AR011G09 Clone 1,058 - 1,128 No other positions
AR009H13 GenomicClone_Finished 557 - 671 No other positions
AR004J18 Clone 684 - 758 No other positions
AR011E08 GenomicClone_Finished 549 - 622 No other positions
AR010M16 Clone 1,237 - 1,316 No other positions
AR002G14 GenomicClone_ActiveFinishing 423 - 515 No other positions
AR010C12 GenomicClone_ActiveFinishing 460 - 561 No other positions
AR001C08 GenomicClone_Finished 872 - 966 No other positions
AR006E02 GenomicClone_Finished 201 - 284 No other positions
AR010E04 Clone 550 - 639 No other positions
AR004B13 GenomicClone_Finished 451 - 561 No other positions
AR003C23 GenomicClone_Finished 1,016 - 1,109 No other positions
AR011E20 GenomicClone_ActiveFinishing 29 - 91 No other positions
AR010G15 GenomicClone_ActiveFinishing 1,139 - 1,220 No other positions
AR007O15 GenomicClone_Finished 732 - 837 No other positions
AR004C09 GenomicClone_Finished 517 - 584 No other positions