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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AhCookUCDavisRGHHyb2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps FPC_Contig49
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Clone
fpc_marker
GenomicClone_Finished
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AhCookUCDavisRGHHyb2 [ View Map Set Info ]
Map Name: FPC_Contig49
Map Start: 0 cM
Map Stop: 840 cM
Features by Type:
21 Clone
27 GenomicClone_Finished
6 fpc_marker
54 Total

Map Features

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Items 1 to 25 of 54.       of 3 | Next
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig49
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AR008E08 Clone 558 - 611 No other positions
AR010G23 GenomicClone_Finished 87 - 194 No other positions
AR005F07 GenomicClone_Finished 419 - 508 No other positions
AR011K07 GenomicClone_Finished 294 - 376 No other positions
AR006N14 GenomicClone_Finished 570 - 629 No other positions
AR006L07 Clone 473 - 535 No other positions
AR005B02 Clone 174 - 243 No other positions
AR008P15 GenomicClone_Finished 194 - 295 No other positions
AR009D05 GenomicClone_Finished 669 - 736 No other positions
AR008M01 GenomicClone_Finished 730 - 810 No other positions
AR005J05 Clone 616 - 690 No other positions
AR001H20 GenomicClone_Finished 342 - 435 No other positions
AR007E09 GenomicClone_Finished 606 - 686 No other positions
AR005D23 Clone 715 - 826 No other positions
AR008J08 GenomicClone_Finished 511 - 593 No other positions
AR010J21 GenomicClone_Finished 138 - 208 No other positions
AR011P19 GenomicClone_Finished 414 - 451 No other positions
AR009B10 Clone 736 - 811 No other positions
AR006O14 GenomicClone_Finished 389 - 478 No other positions
AR010H23 Clone 758 - 840 No other positions
AR011O20 GenomicClone_Finished 87 - 157 No other positions
AR003D20 GenomicClone_Finished 20 - 80 No other positions
AR005B06 Clone 669 - 734 No other positions
AR003C12 Clone 49 - 122 No other positions
AR009I20 GenomicClone_Finished 660 - 738 No other positions