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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps I
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: I
Map Start: 0 cM
Map Stop: 125.18 cM
Features by Type:
3 Gene
2 PCR
2 QTL_fungal
6 QTL_inorganic
4 QTL_leaf-stem
1 QTL_misc
1 QTL_nematode
10 QTL_oil
4 QTL_other-seed
3 QTL_pod
11 QTL_protein
1 QTL_reprod-period
4 QTL_whole-plant
7 QTL_yield
2 RAPD
32 RFLP
53 SNP
59 SSR
205 Total

Map Features

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Items 1 to 25 of 205.       of 9 | Next
soybean - GmComposite2003 - I
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SDS 7-6 QTL_fungal 45.22 - 47.22 No other positions
Sd yld 9-1 QTL_yield 34.35 - 36.35 No other positions
Sd yld 10-1 QTL_yield 31.4 - 33.4 No other positions
Sd yld 12-3 QTL_yield 111.7 - 113.7 No other positions
Sd yld 14-1 QTL_yield 36.4 - 36.94 No other positions
SCN 12-1 QTL_nematode 37.06 - 39.06 No other positions
Sclero 2-15 QTL_fungal 19.34 - 21.34 No other positions
FT 2-3 QTL_reprod-period 32 - 41 No other positions
NECRO 1-1 QTL_inorganic 35.94 - 37.94 No other positions
Sd wt 8-1 QTL_other-seed 31.42 - 33.42 No other positions
Sd wt 9-1 QTL_other-seed 43 - 45 No other positions
Sd wt 12-8 QTL_other-seed 21.84 - 23.84 No other positions
Prot 3-12 QTL_protein 31.42 - 33.42 No other positions
Prot 10-1 QTL_protein 34.35 - 36.35 No other positions
Prot 11-1 QTL_protein 31.42 - 33.42 No other positions
Prot 15-1 QTL_protein 36.4 - 36.94 No other positions
Prot 17-1 QTL_protein 35.94 - 37.94 No other positions
Prot 1-4 QTL_protein 31.4 - 33.4 No other positions
Prot 1-1 QTL_protein 37.06 - 39.06 No other positions
Prot 1-2 QTL_protein 38.4 - 40.4 No other positions
Prot 1-3 QTL_protein 31.42 - 33.42 No other positions
Pod mat 12-1 QTL_pod 31.4 - 33.4 No other positions
Sd yld 15-15 QTL_yield 111.7 - 113.7 No other positions
Pod mat 11-1 QTL_pod 34.35 - 36.35 No other positions
Pl ht 12-1 QTL_whole-plant 34.35 - 36.35 No other positions