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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps N
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Marker
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_nematode
QTL_other-seed
QTL_pod
QTL_protein
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: N
Map Start: -1 cM
Map Stop: 137 cM
Features by Type:
4 Gene
1 Marker
11 QTL_fungal
9 QTL_inorganic
8 QTL_leaf-stem
1 QTL_nematode
4 QTL_other-seed
1 QTL_pod
4 QTL_protein
5 QTL_whole-plant
3 QTL_yield
6 RAPD
32 RFLP
44 SNP
66 SSR
199 Total

Map Features

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Items 1 to 25 of 199.       of 8 | Next
soybean - GmComposite2003 - N
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SDS 8-3 QTL_fungal 44.14 - 46.14 No other positions
Pl ht 17-5 QTL_whole-plant 52.25 - 54.25 No other positions
Pl ht 17-7 QTL_whole-plant 74.91 - 76.91 No other positions
SDS 2-7 QTL_fungal 135 - 137 No other positions
SDS 2-8 QTL_fungal 113 - 115 No other positions
SDS 1-2 QTL_fungal 135 - 137 No other positions
SDS 1-4 QTL_fungal 113 - 115 No other positions
Sclero 2-21 QTL_fungal 27.52 - 29.52 No other positions
Sclero 3-15 QTL_fungal 27.52 - 29.52 No other positions
Sclero 3-16 QTL_fungal 52.25 - 54.25 No other positions
Sclero 4-9 QTL_fungal 27.52 - 29.52 No other positions
Sclero 5-13 QTL_fungal 27.52 - 29.52 No other positions
Sclero 6-10 QTL_fungal 27.52 - 29.52 No other positions
SCN 4-3 QTL_nematode 33.91 - 35.91 No other positions
Sd yld 4-1 QTL_yield 135 - 137 No other positions
Prot 4-8 QTL_protein 29.35 - 31.35 No other positions
Prot 4-9 QTL_protein 33.4 - 35.4 No other positions
Pl ht 6-11 QTL_whole-plant 24.49 - 26.49 No other positions
Pl ht 13-6 QTL_whole-plant -1 - 1 No other positions
Lf lgth 5-1 QTL_leaf-stem -1 - 1 No other positions
Lf lgth 2-3 QTL_leaf-stem 24.49 - 26.49 No other positions
Beta conglycinin 1-1 QTL_protein 75.49 - 77.49 No other positions
Fe effic 12-2 QTL_inorganic 58.4 - 74.5 No other positions
Hrd Sd 1-5 QTL_other-seed 29.4 - 31.4 No other positions
Hrd Sd 1-7 QTL_other-seed 15.7 - 17.7 No other positions