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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmCons40cM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmCons40cM [ View Map Set Info ]
Map Name: B2
Map Start: 0 cM
Map Stop: 100.27 cM
Features by Type:
144 SNP
33 SSR
177 Total

Map Features

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Items 1 to 25 of 177.       of 8 | Next
soybean - GmCons40cM - B2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BARC-013365-00489 SNP 3.28 No other positions
BARC-060097-16375 SNP 3.38 No other positions
BARC-030905-06965 SNP 4.27 soybean - GmCons30cM - B2 BARC-030905-06965 SNP 4.8 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 BARC-030905-06965 SNP 4.8 (cM) Automated name-based, Automated name-based View Maps
BARC-014285-01304 SNP 4.94 soybean - GmComposite2003 - B2 BARC-014285-01304 SNP 5.74 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - B2 BARC-014285-01304 SNP 5.74 (cM) Automated name-based, Automated name-based View Maps
Satt577 SSR 5.47 soybean - GmCons30cM - B2 Satt577 SSR 6.05 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 Satt577 SSR 6.05 (cM) Automated name-based, Automated name-based View Maps
BARC-062271-17735 SNP 5.48 No other positions
Sat_177 SSR 5.88 soybean - GmCons30cM - B2 Sat_177 SSR 7.84 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 Sat_177 SSR 7.84 (cM) Automated name-based, Automated name-based View Maps
BARC-014457-01378 SNP 6.37 soybean - GmCons30cM - B2 BARC-014457-01378 SNP 1.22 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 BARC-014457-01378 SNP 1.22 (cM) Automated name-based, Automated name-based View Maps
BARC-058633-15342 SNP 7.88 No other positions
BARC-061447-18864 SNP 9.97 No other positions
BARC-028553-05949 SNP 10.43 No other positions
BARC-022025-04259 SNP 11.34 No other positions
BARC-046036-10200 SNP 11.34 No other positions
BARC-065623-19586 SNP 11.34 No other positions
BARC-017127-02213 SNP 11.51 No other positions
BARC-028723-05998 SNP 11.89 soybean - GmComposite2003 - B2 BARC-028723-05998 SNP 14.64 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - B2 BARC-028723-05998 SNP 14.65 (cM) Automated name-based, Automated name-based View Maps
BARC-040733-07831 SNP 12.47 soybean - GmCons30cM - B2 BARC-040733-07831 SNP 12.21 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 BARC-040733-07831 SNP 12.21 (cM) Automated name-based, Automated name-based View Maps
BARC-028893-06035 SNP 12.53 soybean - GmCons30cM - B2 BARC-028893-06035 SNP 12.21 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 BARC-028893-06035 SNP 12.21 (cM) Automated name-based, Automated name-based View Maps
BARC-024295-04827 SNP 12.59 soybean - GmCons30cM - B2 BARC-024295-04827 SNP 14.7 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - B2 BARC-024295-04827 SNP 14.69 (cM) Automated name-based, Automated name-based View Maps
BARC-060237-16491 SNP 12.59 No other positions
BARC-061557-17270 SNP 12.59 No other positions
BARC-065411-19443 SNP 13.1 No other positions
BARC-022025-04258 SNP 13.74 soybean - GmComposite2003 - B2 BARC-022025-04258 SNP 15.95 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - B2 BARC-022025-04258 SNP 15.96 (cM) Automated name-based, Automated name-based View Maps
BARC-051559-11161 SNP 14.48 No other positions
BARC-020561-04671 SNP 14.85 No other positions