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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set alfalfa-MsJulier2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: alfalfa - MsJulier2003 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 89.09 cM
Features by Type:
17 SSR
17 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
alfalfa - MsJulier2003 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MTIC124 SSR 0 No other positions
MTIC51-2 SSR 6.06 No other positions
MTIC51-1 SSR 20.4 No other positions
MTLEC-1 SSR 25.86 No other positions
MTLEC-2 SSR 28.59 No other positions
MTIC131 SSR 31.5 No other positions
AFct32 SSR 35.13 alfalfa - MsSledge2005 - 3 AFCT32 SSR 36.23 (cM) Automated name-based, Automated name-based View Maps
MTIC189 SSR 35.36 alfalfa - MsSledge2005 - 3 MTIC189 SSR 35.75 (cM) Automated name-based, Automated name-based View Maps
MTIC345 SSR 47.68 No other positions
MTIC475 SSR 48.82 alfalfa - MsSledge2005 - 3 MTIC475 SSR 59.93 (cM) Automated name-based, Automated name-based View Maps
AI974357-1 SSR 54.89 No other positions
AI974357-2 SSR 57.12 No other positions
MTIC338 SSR 57.27 alfalfa - MsSledge2005 - 3 MTIC338 SSR 42.65 (cM) Automated name-based, Automated name-based View Maps
MTIC237 SSR 59.17 alfalfa - MsSledge2005 - 3 MTIC237 SSR 59.89 (cM) Automated name-based, Automated name-based View Maps
MTIC7 SSR 63.87 No other positions
MTIC77-2 SSR 76.6 No other positions
MTIC169 SSR 89.09 No other positions