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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-PvMcCleanNDSU2007
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
allele-indel
Allozyme
CAPS
dCAPS
isozyme
RAPD
RFLP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvMcCleanNDSU2007 [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 77 cM
Features by Type:
1 Allozyme
13 CAPS
2 RAPD
6 RFLP
1 SSR
1 allele-indel
10 dCAPS
1 isozyme
35 Total

Map Features

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Items 1 to 25 of 35.       of 2 | Next
common bean - PvMcCleanNDSU2007 - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
D1080 RFLP 0 common bean - BAT93_x_JALOEEP558_b - B05 D1080 RFLP 7.02 (cM) Automated name-based, Automated name-based View Maps
g564 CAPS 12 No other positions
Diap-1 Allozyme 15 No other positions
g1188 CAPS 16 No other positions
g136 CAPS 16 No other positions
DROD20b RAPD 19 No other positions
g1676 CAPS 24 No other positions
g2596 dCAPS 24 No other positions
D1198 RFLP 24 common bean - BAT93_x_JALOEEP558_b - B05 D1198 RFLP 30.56 (cM) Automated name-based, Automated name-based View Maps
g2512 dCAPS 25 No other positions
g1395 dCAPS 26 No other positions
g1226 dCAPS 26 - 27 No other positions
g292 dCAPS 27 No other positions
DAco-2 isozyme 31 No other positions
g2507 dCAPS 31 - 38 No other positions
g985 dCAPS 31 - 38 No other positions
BM138 SSR 31 - 38 common bean - PvConsensus_GaleanoFernandez2011_a - Pv05 BM138 SSR 84.76 (cM) Automated name-based, Automated name-based View Maps
g2410 dCAPS 38 No other positions
g1968 CAPS 45 No other positions
g34 CAPS 47 No other positions
D1157 RFLP 47 - 48 common bean - BAT93_x_JALOEEP558_b - B05 D1157 RFLP 51.63 (cM) Automated name-based, Automated name-based View Maps
g174 dCAPS 48 No other positions
g1086 dCAPS 49 No other positions
g2557 CAPS 50 No other positions
g1333 CAPS 50 - 52 No other positions