LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-BAT93_x_JALOEEP558_c
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps PvLG08
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - BAT93_x_JALOEEP558_c [ View Map Set Info ]
Map Name: PvLG08
Map Start: 0 cM
Map Stop: 124.2 cM
Features by Type:
72 SNP
72 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 72.       of 3 | Next
common bean - BAT93_x_JALOEEP558_c - PvLG08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TOG894007_849 SNP 124.2 No other positions
TOG898528_83 SNP 118 No other positions
TOG898528_164 SNP 117.1 No other positions
TOG908346_456 SNP 117.1 No other positions
TOG895245_245 SNP 116.3 No other positions
TOG897285_31 SNP 116.3 No other positions
TOG908346_364 SNP 116.3 No other positions
TOG895030_430 SNP 115.5 No other positions
TOG894070_261 SNP 114.7 No other positions
TOG894070_290 SNP 114.7 No other positions
TOG895030_340 SNP 114.7 No other positions
TOG897558_389 SNP 114.7 No other positions
TOG897558_103 SNP 113.9 No other positions
TOG935983_331 SNP 113.9 No other positions
TOG899729_237 SNP 113.1 No other positions
TOG899729_79 SNP 113.1 No other positions
TOG908356_281 SNP 113.1 No other positions
TOG915502_64 SNP 113.1 No other positions
TOG915502_68 SNP 113.1 No other positions
TOG894141_709 SNP 110.6 No other positions
TOG895412_225 SNP 110.6 No other positions
TOG895412_564 SNP 110.6 No other positions
TOG894141_219 SNP 106.3 No other positions
TOG895747_525 SNP 106.3 No other positions
TOG899241_222 SNP 95.6 No other positions