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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D1a
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Marker
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: D1a
Map Start: 0 cM
Map Stop: 120.88 cM
Features by Type:
4 Gene
2 Marker
3 PCR
4 QTL_fungal
4 QTL_inorganic
1 QTL_insect
6 QTL_leaf-stem
5 QTL_nematode
2 QTL_oil
2 QTL_other-seed
2 QTL_pod
3 QTL_protein
4 QTL_whole-plant
5 QTL_yield
3 RAPD
38 RFLP
42 SNP
73 SSR
203 Total

Map Features

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Items 1 to 25 of 203.       of 9 | Next
soybean - GmComposite2003 - D1a
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Pl ht 17-10 QTL_whole-plant 66.79 - 68.79 No other positions
Sd yld 8-2 QTL_yield 63.52 - 65.52 No other positions
Sclero 3-4 QTL_fungal 108.89 - 109.67 No other positions
Sclero 4-1 QTL_fungal 108.89 - 109.67 No other positions
Sclero 5-3 QTL_fungal 108.89 - 109.67 No other positions
Sclero 2-5 QTL_fungal 108.89 - 109.67 No other positions
G Gene 0 No other positions
Oil 23-2 QTL_oil 17.52 - 56.2 No other positions
NitR7 1-2 QTL_inorganic 55.57 - 57.57 No other positions
Sd wt 7-4 QTL_other-seed 74.3 - 76.3 No other positions
A295_1 RFLP 87.8 No other positions
Prot 13-1 QTL_protein 76.5 - 78.5 No other positions
Prot 3-4 QTL_protein 5.43 - 7.43 No other positions
Prot 3-5 QTL_protein 39.8 - 41.8 No other positions
Mng287_1 RFLP 87.47 No other positions
Pod mat 13-2 QTL_pod 46.6 - 48.6 No other positions
Pl ht 6-8 QTL_whole-plant 86.8 - 88.8 No other positions
Pod mat 1-2 QTL_pod 37.1 - 39.1 No other positions
Oil 13-2 QTL_oil 68.9 - 70.9 No other positions
Mj 1-1 QTL_nematode 36.9 - 38.9 No other positions
Ldge 8-1 QTL_whole-plant 74.3 - 76.3 No other positions
Lf lgth 1-1 QTL_leaf-stem 37.1 - 39.1 No other positions
Lf lgth 1-2 QTL_leaf-stem 33.9 - 35.9 No other positions
Fe effic 1-3 QTL_inorganic 101.3 - 103.3 No other positions
Fe effic 1-4 QTL_inorganic 93.9 - 95.9 No other positions