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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps G
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
Gene
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: G
Map Start: -2.59 cM
Map Stop: 133 cM
Features by Type:
1 AFLP
5 Gene
27 QTL_fungal
12 QTL_inorganic
2 QTL_insect
18 QTL_leaf-stem
43 QTL_nematode
5 QTL_oil
8 QTL_other-seed
2 QTL_pod
5 QTL_protein
2 QTL_reprod-period
4 QTL_whole-plant
6 QTL_yield
17 RAPD
63 RFLP
59 SNP
71 SSR
350 Total

Map Features

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Items 1 to 25 of 350.       of 14 | Next
soybean - GmComposite2003 - G
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SDS 8-1 QTL_fungal -1 - 1 No other positions
Sprt yld 1-2 QTL_yield 98.3 - 100.3 No other positions
Prot 20-1 QTL_protein 11.74 - 13.74 No other positions
Pl ht 17-3 QTL_whole-plant 95.57 - 97.57 No other positions
SDS 7-2 QTL_fungal 3.53 - 5.53 No other positions
SDS 7-3 QTL_fungal 11.74 - 13.74 No other positions
SDS 7-4 QTL_fungal 20.6 - 22.6 No other positions
SDS 6-2 QTL_fungal 3.53 - 5.53 No other positions
SDS 7-1 QTL_fungal -1.5 - 1.5 No other positions
SDS 6-1 QTL_fungal 7.56 - 9.56 No other positions
SDS 4-1 QTL_fungal 4.6 - 6.6 No other positions
SDS 4-2 QTL_fungal 131 - 133 No other positions
SDS 4-3 QTL_fungal 4.6 - 6.6 No other positions
SDS 5-1 QTL_fungal 0.84 - 2.84 No other positions
SDS 3-1 QTL_fungal 10.6 - 12.6 No other positions
SDS 3-2 QTL_fungal 1 - 3 No other positions
SDS 3-3 QTL_fungal 20.6 - 22.6 No other positions
SDS 3-4 QTL_fungal 26.7 - 28.7 No other positions
SDS 2-1 QTL_fungal 10.6 - 12.6 No other positions
SDS 2-2 QTL_fungal 1 - 3 No other positions
SDS 2-3 QTL_fungal 26.7 - 28.7 No other positions
SDS 2-4 QTL_fungal 20.6 - 22.6 No other positions
Sclero 3-10 QTL_fungal 95.57 - 97.57 No other positions
Sclero 4-5 QTL_fungal 42.38 - 44.38 No other positions
Sclero 4-6 QTL_fungal 95.57 - 97.57 No other positions