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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps L
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: L
Map Start: -1 cM
Map Stop: 116.97 cM
Features by Type:
6 Gene
9 QTL_fungal
3 QTL_inorganic
71 QTL_leaf-stem
9 QTL_misc
2 QTL_nematode
13 QTL_oil
12 QTL_other-seed
13 QTL_pod
7 QTL_protein
14 QTL_reprod-period
36 QTL_whole-plant
14 QTL_yield
2 RAPD
46 RFLP
41 SNP
66 SSR
364 Total

Map Features

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Items 1 to 25 of 364.       of 15 | Next
soybean - GmComposite2003 - L
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SLW 1-4 QTL_leaf-stem 3.1 - 5.1 No other positions
SLW 1-5 QTL_leaf-stem 94.4 - 96.4 No other positions
Sprt yld 1-4 QTL_yield 45.4 - 46.4 No other positions
Stm diam 1-1 QTL_leaf-stem 85.6 - 87.6 No other positions
Stm diam 1-2 QTL_leaf-stem 100.3 - 102.3 No other positions
Pod mat 14-1 QTL_pod 53.57 - 55.37 No other positions
Oil 23-4 QTL_oil 66.51 - 89.13 No other positions
Oil 23-5 QTL_oil 91.1 - 101.9 No other positions
Sd yld 8-1 QTL_yield 70.44 - 72.44 No other positions
Sd yld 11-6 QTL_yield 88.1 - 90.1 No other positions
Sclero 2-19 QTL_fungal 29.19 - 31.19 No other positions
Sclero 2-20 QTL_fungal 53.57 - 55.5 No other positions
Sclero 3-13 QTL_fungal 29.19 - 31.19 No other positions
Sclero 3-14 QTL_fungal 53.57 - 55.5 No other positions
Sclero 4-8 QTL_fungal 29.19 - 31.19 No other positions
Sclero 5-11 QTL_fungal 28.27 - 30.19 No other positions
Sclero 5-12 QTL_fungal 53.57 - 55.5 No other positions
Sclero 6-8 QTL_fungal 29.19 - 31.19 No other positions
Sclero 6-9 QTL_fungal 53.57 - 55.5 No other positions
Reprod 4-5 QTL_reprod-period 77.23 - 79.23 No other positions
Reprod 4-6 QTL_reprod-period 88.1 - 90.1 No other positions
Reprod 3-2 QTL_reprod-period 94.4 - 96.4 No other positions
Reprod 3-3 QTL_reprod-period 106.24 - 108.24 No other positions
FT 2-2 QTL_reprod-period 94 - 101 No other positions
Sd wt 13-9 QTL_other-seed 91 - 93 No other positions