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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmCons40cM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps C2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmCons40cM [ View Map Set Info ]
Map Name: C2
Map Start: 0 cM
Map Stop: 136.51 cM
Features by Type:
216 SNP
48 SSR
264 Total

Map Features

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Items 1 to 25 of 264.       of 11 | Next
soybean - GmCons40cM - C2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BARC-018915-03279 SNP 136.51 soybean - GmCons30cM - C2 BARC-018915-03279 SNP 146.53 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 BARC-018915-03279 SNP 146.53 (cM) Automated name-based, Automated name-based View Maps
BARC-030551-06898 SNP 135.04 No other positions
BARC-025179-06455 SNP 135.04 No other positions
Satt357 SSR 133.35 soybean - GmCons30cM - C2 Satt357 SSR 151.91 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 Satt357 SSR 151.91 (cM) Automated name-based, Automated name-based View Maps
BARC-042781-08406 SNP 132.85 No other positions
BARC-038861-07350 SNP 132.41 No other positions
BARC-062639-17962 SNP 130.27 No other positions
BARC-041427-07981 SNP 130.27 No other positions
BARC-064297-18613 SNP 129.53 No other positions
BARC-064859-18826 SNP 128.37 No other positions
Satt371 SSR 127.93 soybean - GmCons30cM - C2 Satt371 SSR 145.48 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 Satt371 SSR 145.47 (cM) Automated name-based, Automated name-based View Maps
BARC-047703-10385 SNP 126.94 No other positions
BARC-042663-08339 SNP 126.94 No other positions
BARC-038923-07396 SNP 126.94 No other positions
BARC-016969-02170 SNP 126.94 No other positions
Sat_252 SSR 116.34 soybean - GmCons30cM - C2 Sat_252 SSR 127 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 Sat_252 SSR 127 (cM) Automated name-based, Automated name-based View Maps
Satt316 SSR 115.61 soybean - GmComposite2003 - C2 Satt316 SSR 127.66 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - C2 Satt316 SSR 127.67 (cM) Automated name-based, Automated name-based View Maps
Satt433 SSR 114.94 soybean - GmCons30cM - C2 Satt433 SSR 128.23 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 Satt433 SSR 128.22 (cM) Automated name-based, Automated name-based View Maps
BARC-025767-05060 SNP 114.46 soybean - GmCons30cM - C2 BARC-025767-05060 SNP 122.95 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 BARC-025767-05060 SNP 122.95 (cM) Automated name-based, Automated name-based View Maps
Satt202 SSR 114.18 soybean - GmCons30cM - C2 Satt202 SSR 126.24 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 Satt202 SSR 126.23 (cM) Automated name-based, Automated name-based View Maps
BARC-038885-07387 SNP 114.13 soybean - GmCons30cM - C2 BARC-038885-07387 SNP 131.62 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 BARC-038885-07387 SNP 131.61 (cM) Automated name-based, Automated name-based View Maps
BARC-028445-05875 SNP 113.81 soybean - GmCons30cM - C2 BARC-028445-05875 SNP 129.43 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 BARC-028445-05875 SNP 129.43 (cM) Automated name-based, Automated name-based View Maps
BARC-060249-16499 SNP 113.36 No other positions
BARC-054227-12382 SNP 113.28 No other positions
BARC-021425-04104 SNP 113.24 soybean - GmCons30cM - C2 BARC-021425-04104 SNP 124.23 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - C2 BARC-021425-04104 SNP 124.22 (cM) Automated name-based, Automated name-based View Maps