LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set pea-PsWeeden2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
cDNA
EST
Marker
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: pea - PsWeeden2005 [ View Map Set Info ]
Map Name: 1
Map Start: 0 cM
Map Stop: 85 cM
Features by Type:
1 EST
25 Marker
1 RFLP
3 cDNA
30 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 30.       of 2 | Next
pea - PsWeeden2005 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
P445 RFLP 0 - 10 No other positions
Adh3 Marker 0 - 10 No other positions
Cop1 Marker 10 No other positions
cDNA 267 cDNA 12 No other positions
c148b cDNA 12 - 14 No other positions
Nod3 Marker 14 No other positions
Q407 Marker 14 - 16 No other positions
cDNA44 cDNA 16 No other positions
Enod7 Marker 17 No other positions
Sym2 Marker 18 No other positions
cDNA164 Marker 19 No other positions
Lb Marker 21 No other positions
D Marker 23 No other positions
Idh Marker 26 No other positions
Sym19 Marker 26 - 37 No other positions
SHMT Marker 26 - 37 No other positions
Enod40 Marker 37 barrel medic - MtYoungUMinn2006 - 5 ENOD40 Marker 18 (cM) Automated name-based, Automated name-based View Maps
ACL Marker 46 narrow-leaved blue lupine - lupanNelson2010 - NLL-19 ACL Marker 0.6 (cM) Automated name-based, Automated name-based View Maps
Alatc Marker 50 No other positions
Q184 EST 50 - 64 No other positions
PSMPA7225 Marker 64 No other positions
cDNA76 Marker 64 - 74 No other positions
GdcH Marker 64 - 74 No other positions
Lox Marker 64 - 74 No other positions
Sym10 Marker 74 No other positions