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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set common bean-PvConsensus_GaleanoFernandez2011_a
(Reference Set)
Min.
Correspondences
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Maps Pv05
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
QTL_development
QTL_root
QTL_seed
QTL_whole-plant
RAPD
SNP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvConsensus_GaleanoFernandez2011_a [ View Map Set Info ]
Map Name: Pv05
Map Start: 0 cM
Map Stop: 132.93 cM
Features by Type:
2 AFLP
5 QTL_development
4 QTL_root
3 QTL_seed
1 QTL_whole-plant
10 RAPD
30 SNP
27 SSR
2 STS
84 Total

Map Features

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Items 1 to 25 of 84.       of 4 | Next
common bean - PvConsensus_GaleanoFernandez2011_a - Pv05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
g564 SNP 0 No other positions
g136 SNP 2.09 No other positions
g1188 SNP 2.09 No other positions
g985 SNP 6.29 No other positions
Seed weight 1-20 QTL_seed 7.7 - 19.7 No other positions
Full maturity, bean 1-4 QTL_development 7.7 - 22.5 No other positions
17M-Gm SNP 12.89 No other positions
Root length, specific 1-2 QTL_root 13.4 - 30.2 No other positions
Seed weight 1-14 QTL_seed 14.1 - 34.5 No other positions
Bng49 STS 15.31 No other positions
g1395 SNP 18.53 No other positions
g292 SNP 19.65 No other positions
g2507 SNP 20 No other positions
g2596 SNP 21.45 No other positions
g1676 SNP 21.45 No other positions
First flower, bean 1-9 QTL_development 21.8 - 38.7 No other positions
g1226 SNP 21.85 No other positions
Leg729 SNP 23.21 No other positions
g2410 SNP 26.39 No other positions
BM175 SSR 29.13 No other positions
g1968 SNP 30.4 No other positions
Leg209 SNP 31.47 No other positions
g34 SNP 34.53 No other positions
BMd50 SSR 41.02 No other positions
BSn223 SNP 45.92 No other positions