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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set common bean-PvConsensus_GaleanoFernandez2011_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Pv08
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
QTL_development
QTL_organic
QTL_root
QTL_seed
QTL_whole-plant
QTL_yield
RAPD
SNP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvConsensus_GaleanoFernandez2011_a [ View Map Set Info ]
Map Name: Pv08
Map Start: 0 cM
Map Stop: 205.49 cM
Features by Type:
3 AFLP
1 QTL_development
2 QTL_organic
11 QTL_root
6 QTL_seed
1 QTL_whole-plant
4 QTL_yield
10 RAPD
60 SNP
41 SSR
3 STS
142 Total

Map Features

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Items 1 to 25 of 142.       of 6 | Next
common bean - PvConsensus_GaleanoFernandez2011_a - Pv08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BSNP65 SNP 0 No other positions
BMb1208 SSR 1 No other positions
g1084 SNP 6.02 No other positions
g1588 SNP 7.09 No other positions
g1786 SNP 8.6 No other positions
g2543 SNP 15.76 No other positions
g2311 SNP 19.24 No other positions
BMb531 SSR 19.39 No other positions
g135 SNP 20.66 No other positions
g89 SNP 21.13 No other positions
Seed weight 3-10 QTL_seed 23.3 - 88.1 No other positions
BSNP52 SNP 24.42 No other positions
g2393 SNP 24.84 No other positions
BMb445 SSR 25.17 No other positions
O2002 RAPD 26.86 No other positions
BMd25 SSR 28.17 No other positions
g1879 SNP 28.42 No other positions
Z1904 RAPD 35.51 No other positions
Root length 1-2 QTL_root 36.5 - 47.6 No other positions
g1119 SNP 38.57 No other positions
BMb1319 SSR 38.57 No other positions
Root length 1-3 QTL_root 38.9 - 42.8 No other positions
g2567 SNP 39.59 No other positions
SSR-IAC92 SSR 42.11 No other positions
Leg741 SNP 45.31 No other positions