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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set common bean-PvConsensus_GaleanoFernandez2011_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps Pv11
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_development
QTL_root
QTL_seed
QTL_whole-plant
QTL_yield
RAPD
SNP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvConsensus_GaleanoFernandez2011_a [ View Map Set Info ]
Map Name: Pv11
Map Start: 0 cM
Map Stop: 163.79 cM
Features by Type:
2 QTL_development
10 QTL_root
2 QTL_seed
2 QTL_whole-plant
1 QTL_yield
2 RAPD
36 SNP
28 SSR
4 STS
87 Total

Map Features

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Items 1 to 25 of 87.       of 4 | Next
common bean - PvConsensus_GaleanoFernandez2011_a - Pv11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BMa116 SSR 0 No other positions
Leg183 SNP 1.38 No other positions
Root length 2-7 QTL_root 5.1 - 27.9 No other positions
BMd22 SSR 8.75 No other positions
Leg241 SNP 9.18 No other positions
Leg100 SNP 11.08 No other positions
Leg470 SNP 11.08 No other positions
BSNP39 SNP 12.18 No other positions
Root length 1-5 QTL_root 15.3 - 40.9 No other positions
BSNP82 SNP 18.11 No other positions
Root weight 1-3 QTL_root 21.1 - 30.2 No other positions
BMd41 SSR 21.75 No other positions
g811 SNP 23.03 No other positions
First flower, bean 1-5 QTL_development 23.4 - 97.2 No other positions
g785 SNP 25.38 No other positions
BMd33 SSR 26.96 No other positions
BN SSR 26.96 No other positions
Root length 1-6 QTL_root 27.3 - 47.6 No other positions
Leg133 SNP 29.25 No other positions
g2273 SNP 30.93 No other positions
BMd27 SSR 35.25 No other positions
g1731 SNP 35.54 No other positions
Plant height 2-7 QTL_whole-plant 36.4 - 48.4 No other positions
Climbing 1-7 QTL_whole-plant 37 - 61.1 No other positions
g1415 SNP 39.1 No other positions