LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-PvJacksonPurdueFPC2007
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps FPC_Contig1624
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvJacksonPurdueFPC2007 [ View Map Set Info ]
Map Name: FPC_Contig1624
Map Start: 0 cM
Map Stop: 246 cM
Features by Type:
14 Clone
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
common bean - PvJacksonPurdueFPC2007 - FPC_Contig1624
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PV_GBa0039P08 Clone 38 - 142 No other positions
PV_GBa0003E16 Clone 106 - 186 No other positions
PV_GBa0056K05 Clone 39 - 130 No other positions
PV_GBa0064D07 Clone 112 - 225 No other positions
PV_GBa0096O02 Clone 44 - 170 No other positions
PV_GBa0025H12 Clone 128 - 190 No other positions
PV_GBa0099B13 Clone 16 - 114 No other positions
PV_GBa0101K17 Clone 120 - 215 No other positions
PV_GBa0087N21 Clone 69 - 180 No other positions
PV_GBa0085N04 Clone 0 - 110 No other positions
PV_GBa0121C19 Clone 79 - 178 No other positions
PV_GBa0085P22 Clone 8 - 122 No other positions
PV_GBa0021J01 Clone 119 - 195 No other positions
PV_GBa0077A21 Clone 113 - 246 No other positions