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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-PvMcCleanNDSU2007
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
CAPS
dCAPS
RAPD
RFLP
SCAR
size-indel
SNAP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvMcCleanNDSU2007 [ View Map Set Info ]
Map Name: 11
Map Start: 0 cM
Map Stop: 135 cM
Features by Type:
2 AFLP
12 CAPS
3 RAPD
7 RFLP
1 SCAR
1 SNAP
6 dCAPS
1 size-indel
33 Total

Map Features

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Items 1 to 25 of 33.       of 2 | Next
common bean - PvMcCleanNDSU2007 - 11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
D1228 RFLP 0 common bean - BAT93_x_JALOEEP558_b - B11 D1228 RFLP 16.43 (cM) Automated name-based, Automated name-based View Maps
D1308 RFLP 0 - 34 common bean - BAT93_x_JALOEEP558_b - B11 D1308 RFLP 38.81 (cM) Automated name-based, Automated name-based View Maps
A02P115 AFLP 34 No other positions
g811 CAPS 41 No other positions
g785 CAPS 44 No other positions
g2273 dCAPS 48 No other positions
g1731 CAPS 55 No other positions
g1932 dCAPS 58 No other positions
g1415 dCAPS 58 - 63 No other positions
g1215 CAPS 60 - 61 No other positions
g2307 CAPS 63 No other positions
g2285 SNAP 70 No other positions
g1438 dCAPS 70 - 74 No other positions
g835 CAPS 74 No other positions
DRON9b RAPD 77 No other positions
g1510 CAPS 78 No other positions
g2527 CAPS 78 No other positions
g1168 dCAPS 78 No other positions
g1489 CAPS 78 - 80 No other positions
DROJ9a RAPD 80 No other positions
g156 CAPS 80 - 82 No other positions
DROG5b RAPD 80 - 82 No other positions
P2027 RFLP 80 - 82 common bean - BAT93_x_JALOEEP558_b - B11 P2027 RFLP 72.72 (cM) Automated name-based, Automated name-based View Maps
g1598 CAPS 82 No other positions
D1630 RFLP 82 - 85 No other positions