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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhComposite_SujayGowda2012_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps AhXVI
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhComposite_SujayGowda2012_a [ View Map Set Info ]
Map Name: AhXVI
Map Start: 0 cM
Map Stop: 48.615 cM
Features by Type:
6 SSR
6 Total

Map Features

Restrict by Map:
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[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
peanut - TT_AhComposite_SujayGowda2012_a - AhXVI
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM692 SSR 0 peanut - TT_TAG24_x_ICGV86031_a - LG_AhXII GM692 SSR 91.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A10 GM692 SSR 64.911 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG12 GM692 SSR 88.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A10 GM692 SSR 50.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVI GM692 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXII GM692 SSR 158.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A10 GA161 SSR 88.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM692 SSR 130.41 (cM) Automated name-based, Automated name-based View Maps
GM699 SSR 2.769 peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM699 SSR 132.41 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVI GM699 SSR 2 (cM) Automated name-based, Automated name-based View Maps
GM799 SSR 13.761 peanut - TT_TAG24_x_GPBD4_a - AhXVI GM799 SSR 14.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM799 SSR 144.81 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVI GM799 SSR 0 (cM) Automated name-based, Automated name-based View Maps
GM2307 SSR 23.081 peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM2307 SSR 172.86 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVI GM2307 SSR 33.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVI GM2307 SSR 36.8 (cM) Automated name-based, Automated name-based View Maps
GM2669 SSR 33.388 peanut - TT_TG26_x_GPBD4_a - AhXVI GM2669 SSR 18.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVI GM2669 SSR 44.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM2669 SSR 180.76 (cM) Automated name-based, Automated name-based View Maps
GM1392 SSR 48.615 peanut - TT_TG26_x_GPBD4_a - AhXVI GM1392 SSR 49.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 GM1392 SSR 199.16 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVI GM1392 SSR 63.1 (cM) Automated name-based, Automated name-based View Maps