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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_AhConsensus_GautamiPandey2012_a
(Reference Set)
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Correspondences
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Maps LG_AhXIX
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_GautamiPandey2012_a [ View Map Set Info ]
Map Name: LG_AhXIX
Map Start: 0 cM
Map Stop: 123.6 cM
Features by Type:
8 SSR
8 Total

Map Features

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Items 1 to 8 of 8.
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIX
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pPGPSeq2D12B SSR 0 peanut - TT_AhComposite_SujayGowda2012_a - AhII pPGPseq2D12B SSR 29.906 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 seq2D12B SSR 134.63 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG16 pPGPseq2D12B SSR 34.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG11 pPGSSeq2D12B SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG19 pPGPSeq2D12B SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhII pPGPseq2D12B SSR 38.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhII pPGPseq2D12B SSR 32 (cM) Automated name-based, Automated name-based View Maps
GM2547 SSR 10.1 peanut - TT_ICGS44_x_ICGS76_a - LG11 GM2547 SSR 18.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG19 GM2547 SSR 1.4 (cM) Automated name-based, Automated name-based View Maps
GM625 SSR 49.5 peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 GM625 SSR 3.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXXII GM625 SSR 29.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG15 GM625 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 GM625 SSR 131.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG11 GM625 SSR 58.2 (cM) Automated name-based, Automated name-based View Maps
GM2233a SSR 52.5 peanut - TT_ICGS76_x_CSMG84-1_a - LG19 GM2233a SSR 43.8 (cM) Automated name-based, Automated name-based View Maps
GM1971 SSR 67.4 peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 GM1971.B01 SSR 64.24 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG19 GM1971 SSR 58.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 GM1971.A01 SSR 67.77 (cM) Automated name-based, Automated name-based View Maps
IPAHM569 SSR 80.1 peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 IPAHM569 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG11 IPAHM569 SSR 89.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXXII IPAHM569 SSR 0 (cM) Automated name-based, Automated name-based View Maps
GM1021 SSR 102.3 peanut - AA_A.duranensis_x_A.duranensis_a - A04 GM1021 SSR 57.166 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXIV GM1021 SSR 51.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXIV GM1021 SSR 59.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG15 GM1021 SSR 52.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIV GM1021 SSR 22.697 (cM) Automated name-based, Automated name-based View Maps
GM1570 SSR 123.6 peanut - TT_ICGS76_x_CSMG84-1_a - LG15 GM1570 SSR 74.1 (cM) Automated name-based, Automated name-based View Maps