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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_AhConsensus_GautamiPandey2012_a
(Reference Set)
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Correspondences
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Maps LG_AhXV
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_GautamiPandey2012_a [ View Map Set Info ]
Map Name: LG_AhXV
Map Start: 0 cM
Map Stop: 67.6 cM
Features by Type:
5 SSR
5 Total

Map Features

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Items 1 to 5 of 5.
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXV
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM641 SSR 0 peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 GM641 SSR 79.53 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV GM641 SSR 0 (cM) Automated name-based, Automated name-based View Maps
GM2602 SSR 13.8 peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 GM2602 SSR 90.82 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV GM2602 SSR 13.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXIX GM2602 SSR 0 (cM) Automated name-based, Automated name-based View Maps
GM2603 SSR 14.5 peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 GM2603 SSR 91.57 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A01 GM2603 SSR 41.36 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV GM2603 SSR 14.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXIX GM2603 SSR 0.8 (cM) Automated name-based, Automated name-based View Maps
Seq16G08 SSR 31.9 peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV pPGSSeq16G08 SSR 31.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA01 Seq16G08 SSR 8.794 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 seq16G08.B01 SSR 273.39 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB01 Seq16G08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
TC4E10 SSR 67.6 peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC4E10.B03 SSR 58.85 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 TC4E10 SSR 26.144 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV TC4E10 SSR 67.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 TC4E10.A01 SSR 171.01 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC4E10 SSR 73.805 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TC4E10 SSR 53.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A03 TC4E10 SSR 82.2 (cM) Automated name-based, Automated name-based View Maps