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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A07
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: A07
Map Start: 0 cM
Map Stop: 167.002 cM
Features by Type:
127 SSR
4 STS
2 Marker
12 transposon
145 Total

Map Features

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Items 1 to 25 of 145.       of 6 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A07
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS1803_c1 SSR 0 No other positions
AhTE0025 transposon 2.767 No other positions
AHGS1836 SSR 13.55 No other positions
GM2050 Marker 21.692 No other positions
Seq2E06_c1 SSR 22.784 No other positions
RN34A10 SSR 27.55 peanut - TT_AhConsensus_GautamiFonceka2012_a - A07 RN34A10 SSR 87.87 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 RN34A10 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXVI RN34A10 SSR 5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG09 RN34A10 SSR 56.1 (cM) Automated name-based, Automated name-based View Maps
AHS0035 SSR 27.598 No other positions
AhTE0376 transposon 32.362 No other positions
RN13D04_c1 SSR 32.939 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B07 RN13D04_c2 SSR 9.689 (cM) Automated name-based View Maps
AhTE0965 transposon 33.215 No other positions
AHS0001 SSR 37.524 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AHS0001 SSR 5.401 (cM) Automated name-based, Automated name-based View Maps
AHS2244 SSR 40.089 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AHS2244 SSR 7.727 (cM) Automated name-based, Automated name-based View Maps
AHGS2712_c2 SSR 40.588 No other positions
AHGS1693_c1 SSR 42.565 No other positions
TC22D09_c1 SSR 44.821 No other positions
PM85 Marker 44.869 No other positions
ARS734 STS 45.096 No other positions
AHGS2221_c1 SSR 45.74 No other positions
AHGS1454 SSR 47.43 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AHGS1454 SSR 16.489 (cM) Automated name-based, Automated name-based View Maps
Seq5D05_c1 SSR 49.124 No other positions
AhTE1021 transposon 49.766 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AhTE1021 transposon 26.794 (cM) Automated name-based, Automated name-based View Maps
Seq15B04 SSR 50.522 No other positions
PM42_c2 SSR 51.653 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 PM42_c1 SSR 93.574 (cM) Automated name-based View Maps
TC23E04_c1 SSR 52.341 No other positions
AHGS1213_c1 SSR 54.792 No other positions