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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B01
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B01
Map Start: 0 cM
Map Stop: 84.693 cM
Features by Type:
138 SSR
2 STS
7 Marker
21 transposon
168 Total

Map Features

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Items 1 to 25 of 168.       of 7 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B01
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AhTE0602 transposon 0 No other positions
TC3G01_c1 SSR 4.55 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 TC3G01_c3 SSR 87.658 (cM) Automated name-based View Maps
TC3G01_c2 SSR 6.242 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 TC3G01_c3 SSR 87.658 (cM) Automated name-based View Maps
AHGS1358 SSR 8.914 No other positions
Ai121B11 SSR 13.741 No other positions
AhTE0536 transposon 17.641 No other positions
GM2607 SSR 20.258 peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 GM2607 SSR 254.62 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A01 GM2607 SSR 49.036 (cM) Automated name-based, Automated name-based View Maps
AHGS2245_c1 SSR 20.939 No other positions
Seq9E08_c1 SSR 23.221 No other positions
Ai123K14 SSR 24.538 No other positions
Seq19C03_c2 SSR 24.602 No other positions
Ai119P2 SSR 25.891 No other positions
AHGS1524 SSR 28.001 No other positions
AhTE0313 transposon 28.793 No other positions
AHGS2027_c2 SSR 29.573 No other positions
AhTE0674 transposon 30.338 No other positions
GM1531 Marker 30.9 No other positions
AHGS1478_c3 SSR 30.923 No other positions
AHGS2054 SSR 31.123 No other positions
AHGS2466_c4 SSR 31.545 No other positions
AHS2850_c1 SSR 31.716 No other positions
AHGS1860_c2 SSR 32.198 No other positions
AHGS1182_c2 SSR 32.609 No other positions
AHGS3659 SSR 33.025 peanut - BB_A.ipaensis_x_A.magna_a - BB01 AHGS3659 SSR 2.394 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B01 AHGS3659 SSR 9.5 (cM) Automated name-based, Automated name-based View Maps
AHS1417 SSR 33.375 peanut - BB_A.ipaensis_x_A.magna_a - BB01 AHS1417 SSR 18.847 (cM) Automated name-based, Automated name-based View Maps