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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B02
Map Start: 0 cM
Map Stop: 111.975 cM
Features by Type:
127 SSR
1 STS
2 Marker
24 transposon
154 Total

Map Features

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Items 1 to 25 of 154.       of 7 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Ai121G16 STS 0 No other positions
AHS1855 SSR 2.639 peanut - TT_Tifrunner_x_GT-C20_b - LG16 AHS1855 SSR 83.8 (cM) Automated name-based, Automated name-based View Maps
Seq2D12 SSR 5.464 No other positions
AhTE0628 transposon 10.68 No other positions
AhTE0611 transposon 14.128 No other positions
Seq5B02_c1 SSR 15.486 No other positions
GM2196 SSR 26.504 peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 GM2196 SSR 131.21 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG16 GM2196 SSR 20.2 (cM) Automated name-based, Automated name-based View Maps
AhTE0775 transposon 28.558 No other positions
AhTE0778 transposon 32.56 No other positions
AHGS2344 SSR 33.632 No other positions
TC9F04_c3 SSR 34.71 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 TC9F04_c2 SSR 108.193 (cM) Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 TC9F04_c1 SSR 66.832 (cM) Automated name-based View Maps
AhTE0878 transposon 35.825 No other positions
AHGS1940_c2 SSR 38.906 No other positions
AHGS1727_c4 SSR 40.82 No other positions
AHGS1839_c1 SSR 41.858 No other positions
AHS0314_c2 SSR 43.882 No other positions
AHGS1269 SSR 45.568 No other positions
IPAHM524_c1 SSR 46.112 No other positions
Seq11H01_c2 SSR 48.146 No other positions
AHGS2680_c1 SSR 48.17 No other positions
Ah331 SSR 49.768 peanut - BB_A.ipaensis_x_A.magna_a - BB02 Ah331 SSR 1.044 (cM) Automated name-based, Automated name-based View Maps
RN20C10_c2 SSR 50.144 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A02 RN20C10_c1 SSR 30.007 (cM) Automated name-based View Maps
AHGS1261 SSR 50.253 No other positions
AHS0046 SSR 50.81 peanut - BB_A.ipaensis_x_A.magna_b - B02 AHS0046 SSR 19.9 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS0046 SSR 2.279 (cM) Automated name-based, Automated name-based View Maps
AhTE0791 transposon 51.827 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB02 AhTE0791 transposon 15.005 (cM) Automated name-based, Automated name-based View Maps