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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
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Maps B03
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B03
Map Start: 0 cM
Map Stop: 144.789 cM
Features by Type:
192 SSR
4 STS
9 Marker
29 transposon
234 Total

Map Features

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Items 1 to 25 of 234.       of 10 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Seq2E06_c2 SSR 0 No other positions
TC3E02_c3 SSR 6.947 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 TC3E02_c1 SSR 18.488 (cM) Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A03 GM32 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 TC3E02_c2 SSR 17.633 (cM) Automated name-based View Maps
AhTE0178_c2 transposon 9.622 No other positions
Seq4F10_c2 SSR 10.989 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 Seq4F10_c1 SSR 15.552 (cM) Automated name-based View Maps
AHGS0268 SSR 11.831 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS0268 SSR 25.387 (cM) Automated name-based, Automated name-based View Maps
AHGS2674 SSR 12.066 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS2674 SSR 26.673 (cM) Automated name-based, Automated name-based View Maps
AHGS2562 SSR 12.722 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS2562 SSR 24.733 (cM) Automated name-based, Automated name-based View Maps
AHS1042_c1 SSR 13.548 No other positions
Seq5G02 SSR 13.719 peanut - BB_A.ipaensis_x_A.magna_a - BB03 Seq5G02 SSR 24.442 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 Seq5G02 SSR 3.5 (cM) Automated name-based, Automated name-based View Maps
AHS1042_c2 SSR 14.29 No other positions
AHS0323 SSR 14.942 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHS0323 SSR 26.363 (cM) Automated name-based, Automated name-based View Maps
TC23E04_c2 SSR 17 No other positions
Seq16E06 SSR 18.057 peanut - BB_A.ipaensis_x_A.magna_b - B03 Seq16E06 SSR 6.4 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB03 Seq16E06 SSR 21.363 (cM) Automated name-based, Automated name-based View Maps
AHGS1561 SSR 18.679 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS1561 SSR 25.824 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1561 SSR 12.7 (cM) Automated name-based, Automated name-based View Maps
TC24G10 SSR 21.691 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC24G10 SSR 10.881 (cM) Automated name-based, Automated name-based View Maps
RN8C09 SSR 22.616 peanut - BB_A.ipaensis_x_A.magna_a - BB03 RN8C09 SSR 22.801 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 RN8C09 SSR 10.4 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 RN8C09 SSR 12.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A03 RN8C09 SSR 249.6 (cM) Automated name-based, Automated name-based View Maps
TC2A02 SSR 23.169 peanut - TT_Tifrunner_x_GT-C20_b - LG18 Ah1TC2A02 SSR 15.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC2A02 SSR 8.55 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB03 TC2A02 SSR 18.2 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A03 TC2A02 SSR 243.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXIV TC2A02 SSR 110 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIV TC2A02 SSR 110 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC2A02 SSR 10.869 (cM) Automated name-based, Automated name-based View Maps
AHS2512 SSR 24.628 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHS2512 SSR 18.16 (cM) Automated name-based, Automated name-based View Maps
TC1A02_c2 SSR 25.97 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B07 TC1A02_c4 SSR 46.371 (cM) Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 TC1A02_c1 SSR 63.576 (cM) Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 TC1A02_c3 SSR 89.598 (cM) Automated name-based View Maps
Seq5D05_c2 SSR 26.025 No other positions
TC29H08 SSR 27.02 peanut - BB_A.ipaensis_x_A.magna_a - BB03 TC29H08 SSR 13.595 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC29H08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 TC29H08 SSR 16.3 (cM) Automated name-based, Automated name-based View Maps
AHGS2526 SSR 27.369 No other positions
AhTE0249 transposon 28.818 No other positions
AHGS2254_c2 SSR 29.344 No other positions
AHS2064 SSR 30.818 No other positions