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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B06
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B06
Map Start: 0 cM
Map Stop: 152.473 cM
Features by Type:
141 SSR
1 STS
5 Marker
29 transposon
176 Total

Map Features

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Items 1 to 25 of 176.       of 8 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AhTE0061 transposon 0 No other positions
AhTE0547_c2 transposon 19.88 No other positions
AhTE0751 transposon 31.83 No other positions
AhTE0933 transposon 36.593 No other positions
AHGS2243_c4 SSR 39.007 No other positions
AHGS2195_c4 SSR 43.736 No other positions
AhTE0496 transposon 46.98 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB06 AhTE0496 transposon 36.709 (cM) Automated name-based, Automated name-based View Maps
AhTE0697 transposon 47.12 No other positions
Seq18G01_c3 SSR 48.867 No other positions
AhTE0372_c2 transposon 50.218 No other positions
AhTE0745 transposon 58.01 No other positions
GA2 SSR 61.388 peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 GA2 SSR 63.3 (cM) Automated name-based, Automated name-based View Maps
AhTE0772 transposon 61.43 No other positions
TC4D09 SSR 61.98 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC4D09 SSR 54.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC4D09 SSR 44.137 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A10 TC4D09 SSR 58.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC4D09 SSR 3.95 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhX TC4D09 SSR 49.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC4D09 SSR 109.4 (cM) Automated name-based, Automated name-based View Maps
Seq4F08 SSR 62.645 peanut - BB_A.ipaensis_x_A.magna_a - BB06 Seq4F08 SSR 34.296 (cM) Automated name-based, Automated name-based View Maps
TC19A02_c3 Marker 62.679 No other positions
AhTE0854 transposon 64.962 No other positions
AhTE0759 transposon 65.379 No other positions
AhTE0967 transposon 65.51 No other positions
AHGS2410 SSR 66.826 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB06 AHGS2410 SSR 16.274 (cM) Automated name-based, Automated name-based View Maps
AHGS2207_c2 SSR 69.197 No other positions
RM2C01 SSR 69.198 peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 RM2C01 SSR 77.59 (cM) Automated name-based, Automated name-based View Maps
AHGS1193_c3 SSR 69.798 No other positions
TC3H07_c2 SSR 69.897 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 TC3H07_c1 SSR 36.922 (cM) Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A06 TC3H07 SSR 0 (cM) Automated name-based, Automated name-based View Maps
AhTE0074 transposon 71.029 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB06 AhTE0074 transposon 22.595 (cM) Automated name-based, Automated name-based View Maps