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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B08
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B08
Map Start: 0 cM
Map Stop: 107.255 cM
Features by Type:
146 SSR
5 STS
4 Marker
21 transposon
176 Total

Map Features

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Items 1 to 25 of 176.       of 8 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS1616 SSR 0 No other positions
AhTE0619 transposon 8.243 No other positions
AhTE0006_c2 transposon 20.268 No other positions
AHGS2249_c1 SSR 26.163 No other positions
AhTE0846 transposon 35.317 No other positions
AHGS1286_c2 SSR 36.48 No other positions
GM1798 SSR 39.012 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 GM1798 SSR 120.93 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A08 GM1798 SSR 59.613 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG4 GM1798 SSR 57.8 (cM) Automated name-based, Automated name-based View Maps
AhTE0724 transposon 39.592 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AhTE0724 transposon 9.968 (cM) Automated name-based, Automated name-based View Maps
AHGS1383_c2 SSR 40.85 No other positions
AC3C07 SSR 41.413 peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 AC3C07.A09 SSR 29.02 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 AC3C07.B08 SSR 115.96 (cM) Automated name-based, Automated name-based View Maps
Ai120I21 SSR 41.592 No other positions
AHS0227_c2 SSR 42.06 No other positions
AhTE0974 transposon 42.877 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AhTE0974 transposon 15.97 (cM) Automated name-based, Automated name-based View Maps
AHS2892 SSR 43.919 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHS2892 SSR 77.7 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB08 AHS2892 SSR 10.621 (cM) Automated name-based, Automated name-based View Maps
AHS2968_c2 SSR 45.058 No other positions
AHGS1470_c2 SSR 45.502 No other positions
AHGS2603_c2 SSR 45.767 No other positions
TC20B05_c2 SSR 46.198 No other positions
AhTE0705 transposon 47.141 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AhTE0705 transposon 11.54 (cM) Automated name-based, Automated name-based View Maps
AHGS2665 SSR 47.264 peanut - BB_A.ipaensis_x_A.magna_a - BB08 AHGS2665 SSR 11.478 (cM) Automated name-based, Automated name-based View Maps
GM1760 SSR 47.775 peanut - TT_TG26_x_GPBD4_a - AhVIII GM1760 SSR 77.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG4 GM1760 SSR 41.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII GM1760 SSR 38.669 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 GM1760.A08 SSR 67.42 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A03 GM1760 SSR 13.955 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII GM1760 SSR 50.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 GM1760.B08 SSR 23.1 (cM) Automated name-based, Automated name-based View Maps
AHGS1444 SSR 48.304 No other positions
AhTE0782 transposon 48.96 No other positions
AHGS1920 SSR 49.083 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AHGS1920 SSR 13.105 (cM) Automated name-based, Automated name-based View Maps
AHGS1186_c2 SSR 49.406 No other positions