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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_AhConsensus_ShirasawaBertioli2013_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B09
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Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
STS
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_ShirasawaBertioli2013_a [ View Map Set Info ]
Map Name: B09
Map Start: 0 cM
Map Stop: 170.544 cM
Features by Type:
148 SSR
1 STS
1 Marker
29 transposon
179 Total

Map Features

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Items 1 to 25 of 179.       of 8 | Next
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2584_c2 SSR 0 No other positions
AhTE1034 transposon 25.459 No other positions
Seq17C09 SSR 30.629 No other positions
AhTE0765 transposon 32.022 No other positions
Ai120B14 SSR 33.596 No other positions
AHGS1197 SSR 36.544 No other positions
AHGS1998 SSR 38.149 No other positions
GM1483_c1 SSR 40.21 No other positions
AhTE0976 transposon 40.544 No other positions
AHGS2529_c1 SSR 41.292 No other positions
AhTE0957 transposon 42.294 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0957 transposon 0.993 (cM) Automated name-based, Automated name-based View Maps
AHGS2529_c2 SSR 42.582 No other positions
AhTE0222 transposon 43.62 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0222 transposon 0 (cM) Automated name-based, Automated name-based View Maps
AHGS2597 SSR 45.038 No other positions
AHGS1969 SSR 46.694 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AHGS1969 SSR 1.61 (cM) Automated name-based, Automated name-based View Maps
AhTE0055 transposon 47.491 No other positions
AhTE0696 transposon 48.37 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0696 transposon 3.205 (cM) Automated name-based, Automated name-based View Maps
AHGS1394 SSR 49.228 No other positions
GM1893 SSR 50.186 peanut - TT_TAG24_x_GPBD4_a - AhIX GM1893 SSR 91.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A09 GM1893 SSR 36.636 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIX GM1893 SSR 52.18 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B09 GM1893 SSR 90.06 (cM) Automated name-based, Automated name-based View Maps
Ai122D24 SSR 50.703 No other positions
AHGS0674 SSR 51.528 No other positions
AhTE0913 transposon 52.12 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0913 transposon 5.688 (cM) Automated name-based, Automated name-based View Maps
AHGS2137 SSR 52.772 No other positions
GM1979 SSR 52.84 peanut - TT_AhConsensus_GautamiFonceka2012_a - B09 GM1979.B09 SSR 14.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVII GM1979 SSR 33.01 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A09 GM1979 SSR 54.475 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIX GM1979 SSR 7.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG07 GM1979 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIX GM1979 SSR 21.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A07 GM1979.A07 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIX GM1979 SSR 10.484 (cM) Automated name-based, Automated name-based View Maps
AhTE0852 transposon 53.741 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0852 transposon 5.688 (cM) Automated name-based, Automated name-based View Maps