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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set cowpea-VuMucheroUCRiverside2009
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: cowpea - VuMucheroUCRiverside2009 [ View Map Set Info ]
Map Name: 11
Map Start: 0 cM
Map Stop: 44.75 cM
Features by Type:
59 SNP
59 Total

Map Features

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Items 1 to 25 of 59.       of 3 | Next
cowpea - VuMucheroUCRiverside2009 - 11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0940 SNP 0 No other positions
1_1137 SNP 0.01 No other positions
1_1440 SNP 0.01 No other positions
1_0702 SNP 2.64 No other positions
1_0886 SNP 2.64 No other positions
1_1052 SNP 3.02 No other positions
1_0603 SNP 3.86 No other positions
1_0905 SNP 5.04 No other positions
1_0531 SNP 5.76 No other positions
1_0805 SNP 5.76 No other positions
1_0894 SNP 5.76 No other positions
1_0134 SNP 5.95 No other positions
1_0757 SNP 11.04 No other positions
1_0553 SNP 11.63 No other positions
1_0414 SNP 12.83 No other positions
1_1390 SNP 13.27 No other positions
1_0028 SNP 16.4 No other positions
1_0802 SNP 17.83 No other positions
1_0033 SNP 19.23 No other positions
1_1124 SNP 19.23 No other positions
1_0486 SNP 20.78 No other positions
1_0966 SNP 20.78 No other positions
1_1345 SNP 21.22 No other positions
1_0311 SNP 22.02 No other positions
1_0212 SNP 22.89 No other positions