LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set cowpea-VuMucheroUCRiverside2009
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: cowpea - VuMucheroUCRiverside2009 [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 66.41 cM
Features by Type:
68 SNP
68 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 68.       of 3 | Next
cowpea - VuMucheroUCRiverside2009 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0364 SNP 0 No other positions
1_0206 SNP 0.01 No other positions
1_0052 SNP 0.45 No other positions
1_0054 SNP 0.45 No other positions
1_0888 SNP 0.45 No other positions
1_0188 SNP 0.95 No other positions
1_0973 SNP 1.09 No other positions
1_0397 SNP 3.61 No other positions
1_0672 SNP 5.1 No other positions
1_0976 SNP 5.43 No other positions
1_0673 SNP 6.15 No other positions
1_0502 SNP 11.92 No other positions
1_0155 SNP 14.23 No other positions
1_0504 SNP 14.44 No other positions
1_1360 SNP 14.44 No other positions
1_0382 SNP 16.48 No other positions
1_1148 SNP 17.02 No other positions
1_1499 SNP 18.65 No other positions
1_1138 SNP 19.54 No other positions
1_0275 SNP 20.72 No other positions
1_0890 SNP 24.23 No other positions
1_0082 SNP 26.52 No other positions
1_1034 SNP 27.03 No other positions
1_0756 SNP 27.17 No other positions
1_1445 SNP 27.82 No other positions