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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set cowpea-VuMucheroUCRiverside2009
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: cowpea - VuMucheroUCRiverside2009 [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 62.56 cM
Features by Type:
75 SNP
75 Total

Map Features

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Items 1 to 25 of 75.       of 3 | Next
cowpea - VuMucheroUCRiverside2009 - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0095 SNP 0 No other positions
1_0605 SNP 3.64 No other positions
1_0684 SNP 7.2 No other positions
1_1003 SNP 7.2 No other positions
1_0045 SNP 7.51 No other positions
1_0442 SNP 7.51 No other positions
1_1366 SNP 7.51 No other positions
1_1132 SNP 9.17 No other positions
1_0049 SNP 9.46 No other positions
1_0309 SNP 10.08 No other positions
1_0292 SNP 10.53 No other positions
1_0271 SNP 11.47 No other positions
1_0789 SNP 11.47 No other positions
1_0507 SNP 12.57 No other positions
1_0979 SNP 12.57 No other positions
1_1001 SNP 13.63 No other positions
1_0478 SNP 15.41 No other positions
1_0624 SNP 15.41 No other positions
1_0173 SNP 17.26 No other positions
1_0806 SNP 17.41 No other positions
1_0819 SNP 19.75 No other positions
1_0452 SNP 21.44 No other positions
1_0557 SNP 22.74 No other positions
1_1492 SNP 27.18 No other positions
1_0986 SNP 28.25 No other positions