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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set cowpea-VuMucheroUCRiverside2009
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: cowpea - VuMucheroUCRiverside2009 [ View Map Set Info ]
Map Name: 6
Map Start: 0 cM
Map Stop: 59.11 cM
Features by Type:
93 SNP
93 Total

Map Features

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Items 1 to 25 of 93.       of 4 | Next
cowpea - VuMucheroUCRiverside2009 - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
1_0323 SNP 0 No other positions
1_0307 SNP 0.42 No other positions
1_0691 SNP 0.42 No other positions
1_0172 SNP 1.46 No other positions
1_0174 SNP 1.48 No other positions
1_0635 SNP 2 No other positions
1_1368 SNP 2 No other positions
1_0300 SNP 2.05 No other positions
1_0927 SNP 2.05 No other positions
1_1331 SNP 2.05 No other positions
1_0690 SNP 2.05 No other positions
1_0751 SNP 2.05 No other positions
1_0908 SNP 2.05 No other positions
1_1530 SNP 2.69 No other positions
1_1333 SNP 3.06 No other positions
1_1403 SNP 4 No other positions
1_1226 SNP 4.41 No other positions
1_0024 SNP 4.57 No other positions
1_0066 SNP 4.57 No other positions
1_0823 SNP 4.57 No other positions
1_1082 SNP 4.57 No other positions
1_1097 SNP 4.57 No other positions
1_1515 SNP 5.47 No other positions
1_0074 SNP 6.48 No other positions
1_0332 SNP 6.48 No other positions