LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set lotus-LjKazusa200905
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LjChr3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
TOG
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: lotus - LjKazusa200905 [ View Map Set Info ]
Map Name: LjChr3
Map Start: 0 cM
Map Stop: 89,974,019 cM
Features by Type:
135 Marker
107 TOG
242 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 242.       of 10 | Next
lotus - LjKazusa200905 - LjChr3
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
VuMucheroUCRiverside2009_4_1_0052 Marker 44,480,852 - 44,481,043 barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_4_1_0052 Marker 3,435,358 - 3,435,549 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 VuMucheroUCRiverside2009_4_1_0052 Marker 50,366,246 - 50,366,668 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm04 VuMucheroUCRiverside2009_4_1_0052 Marker 11,600,841 - 11,601,503 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_9_1_1337 Marker 41,176,044 - 41,176,280 soybean - GmJGI8x - Gm15 VuMucheroUCRiverside2009_9_1_1337 Marker 42,406,667 - 42,407,281 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_9_1_1337 Marker 9,626,522 - 9,627,121 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_9_1_1337 Marker 29,342,345 - 29,349,204 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0128 Marker 46,765,072 - 46,765,305 soybean - GmJGI8x - Gm19 VuMucheroUCRiverside2009_4_1_0128 Marker 45,155,604 - 45,155,795 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_4_1_0128 Marker 42,704,773 - 42,705,518 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_4_1_0128 Marker 30,888,255 - 30,888,362 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_8_CDC16 Marker 8,124,055 - 8,124,297 barrel medic - Mt3.0 - MtChr8 MtYoungUMinn2006_8_CDC16 Marker 13,156,558 - 13,156,914 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 MtYoungUMinn2006_8_CDC16 Marker 33,811,351 - 33,811,587 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 MtYoungUMinn2006_8_CDC16 Marker 28,735,236 - 28,735,472 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_8_1_0241 Marker 83,483,682 - 83,483,882 soybean - GmJGI8x - Gm06 VuMucheroUCRiverside2009_8_1_0241 Marker 881,678 - 881,881 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_8_1_0241 Marker 42,402,189 - 42,402,395 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 VuMucheroUCRiverside2009_8_1_0241 Marker 2,398,398 - 2,401,121 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_0682 Marker 88,014,950 - 88,015,192 soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_10_1_0682 Marker 12,749,123 - 12,753,393 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm15 VuMucheroUCRiverside2009_10_1_0682 Marker 7,550,589 - 7,551,014 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_10_1_0682 Marker 43,043,549 - 43,043,779 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_1520 Marker 9,050,162 - 9,050,563 soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_10_1_1520 Marker 2,909,461 - 2,910,345 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_10_1_1520 Marker 78,846 - 79,283 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_7_1_0370 Marker 66,407,989 - 66,408,963 barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_7_1_0370 Marker 6,114,199 - 6,115,158 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_7_1_0370 Marker 50,509,188 - 50,510,168 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_7_1_0370 Marker 2,993,479 - 2,997,027 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0718 Marker 81,982,681 - 81,983,493 soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0718 Marker 14,926,982 - 14,929,425 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_3_1_0718 Marker 21,786,904 - 21,788,430 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0718 Marker 39,479,830 - 39,481,104 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_0420 Marker 13,733,071 - 13,733,460 soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_10_1_0420 Marker 30,556,645 - 30,560,224 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_10_1_0420 Marker 26,836,216 - 26,836,596 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_10_1_0420 Marker 30,734,748 - 30,735,137 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_0368 Marker 13,503,207 - 13,503,368 barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_10_1_0368 Marker 1,302,484 - 1,302,639 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_10_1_0368 Marker 11,285,360 - 11,285,521 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_10_1_0368 Marker 31,509,540 - 31,514,361 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_11_g1731 Marker 63,098,885 - 63,099,259 soybean - GmJGI8x - Gm12 PvMcCleanNDSU2007_11_g1731 Marker 3,944,499 - 3,944,948 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm11 PvMcCleanNDSU2007_11_g1731 Marker 9,873,718 - 9,895,420 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 PvMcCleanNDSU2007_11_g1731 Marker 28,189,920 - 28,190,369 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_9_1_0377 Marker 83,946,144 - 83,946,386 soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_9_1_0377 Marker 8,539,102 - 8,554,037 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_9_1_0377 Marker 20,508,027 - 20,508,227 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0397 Marker 88,278,982 - 88,279,506 barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_4_1_0397 Marker 11,501,019 - 11,501,522 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm15 VuMucheroUCRiverside2009_4_1_0397 Marker 50,709,802 - 50,710,323 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_4_1_0397 Marker 11,816,418 - 11,819,015 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_1230 Marker 50,955,285 - 50,955,653 barrel medic - Mt3.0 - MtChr1 VuMucheroUCRiverside2009_2_1_1230 Marker 26,472,029 - 26,472,565 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm20 VuMucheroUCRiverside2009_2_1_1230 Marker 40,493,408 - 40,494,759 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_2_1_1230 Marker 43,918,118 - 43,918,636 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_8_AW256656 Marker 64,004,058 - 64,004,291 soybean - GmJGI8x - Gm07 MtYoungUMinn2006_8_AW256656 Marker 10,792,654 - 10,792,851 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 MtYoungUMinn2006_8_AW256656 Marker 20,133,644 - 20,134,306 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 MtYoungUMinn2006_8_AW256656 Marker 15,581,618 - 15,582,127 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_9_1_1291 Marker 78,124,712 - 78,124,846 soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_9_1_1291 Marker 17,421,850 - 17,422,990 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_9_1_1291 Marker 17,144,825 - 17,144,959 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 VuMucheroUCRiverside2009_9_1_1291 Marker 4,960,636 - 4,960,773 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_1_1_1420 Marker 78,274,504 - 78,274,710 soybean - GmJGI8x - Gm18 VuMucheroUCRiverside2009_1_1_1420 Marker 49,103,435 - 49,103,650 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm18 VuMucheroUCRiverside2009_1_1_1420 Marker 49,227,134 - 49,229,471 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_4_AW257289 Marker 35,706,406 - 35,706,891 soybean - GmJGI8x - Gm03 MtYoungUMinn2006_4_AW257289 Marker 19,084,721 - 19,085,188 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 MtYoungUMinn2006_4_AW257289 Marker 2,072,685 - 2,073,194 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 MtYoungUMinn2006_4_AW257289 Marker 18,586,333 - 18,587,765 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_5_g292 Marker 15,055,137 - 15,055,517 soybean - GmJGI8x - Gm12 PvMcCleanNDSU2007_5_g292 Marker 37,733,374 - 37,733,806 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 PvMcCleanNDSU2007_5_g292 Marker 22,026,776 - 22,027,138 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 PvMcCleanNDSU2007_5_g292 Marker 22,306,656 - 22,306,976 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_2_ACL Marker 16,521,602 - 16,521,721 soybean - GmJGI8x - Gm15 MtYoungUMinn2006_2_ACL Marker 49,532,045 - 49,532,191 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 MtYoungUMinn2006_2_ACL Marker 18,723,007 - 18,723,141 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 MtYoungUMinn2006_2_ACL Marker 12,479,174 - 12,480,900 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_4_EPS Marker 66,403,038 - 66,403,163 soybean - GmJGI8x - Gm01 MtYoungUMinn2006_4_EPS Marker 45,863,820 - 45,865,447 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 MtYoungUMinn2006_4_EPS Marker 2,988,815 - 2,988,976 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 MtYoungUMinn2006_4_EPS Marker 6,108,329 - 6,108,493 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_0754 Marker 33,683,587 - 33,684,348 soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_10_1_0754 Marker 42,232,407 - 42,233,493 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_10_1_0754 Marker 6,641,257 - 6,642,060 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr7 VuMucheroUCRiverside2009_10_1_0754 Marker 15,426,078 - 15,426,836 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0204 Marker 47,797,568 - 47,798,401 soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0204 Marker 40,427,334 - 40,445,345 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0204 Marker 2,032,054 - 2,032,545 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr7 VuMucheroUCRiverside2009_3_1_0204 Marker 27,740,301 - 27,741,134 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_1_BE325390 Marker 28,985,213 - 28,985,374 soybean - GmJGI8x - Gm10 MtYoungUMinn2006_1_BE325390 Marker 4,822,468 - 4,822,629 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr1 MtYoungUMinn2006_1_BE325390 Marker 26,180,688 - 26,181,032 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 MtYoungUMinn2006_1_BE325390 Marker 43,704,582 - 43,704,881 (cM) Automated name-based, Automated name-based View Maps