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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set alfalfa-MsSledge2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: alfalfa - MsSledge2005 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 68.94 cM
Features by Type:
45 SSR
45 Total

Map Features

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Items 1 to 25 of 45.       of 2 | Next
alfalfa - MsSledge2005 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BE154 SSR 6.6 No other positions
AW220 SSR 0 No other positions
MtBA12D03F1 SSR 25.61 No other positions
Mt2F06 SSR 32.58 No other positions
AFCT32 SSR 36.23 alfalfa - MsJulier2003 - 3 AFct32 SSR 35.13 (cM) Automated name-based, Automated name-based View Maps
AW235 SSR 44.8 No other positions
AW379 SSR 45.68 No other positions
Mt1A07(2) SSR 49.05 No other positions
Mt2A09 SSR 49.52 No other positions
BG57 SSR 52.14 No other positions
BF43 SSR 54.43 No other positions
BE38 SSR 57.19 No other positions
BF225 SSR 57.93 No other positions
BG82 SSR 58.38 No other positions
BE119 SSR 14.85 No other positions
AW97 SSR 26.87 No other positions
MTIC189 SSR 35.75 alfalfa - MsJulier2003 - 3 MTIC189 SSR 35.36 (cM) Automated name-based, Automated name-based View Maps
MTIC338 SSR 42.65 alfalfa - MsJulier2003 - 3 MTIC338 SSR 57.27 (cM) Automated name-based, Automated name-based View Maps
BF156 SSR 45.43 No other positions
BF79 SSR 48.55 No other positions
Mt1A07 SSR 49.07 No other positions
AW213 SSR 50.88 No other positions
AI08 SSR 52.98 No other positions
BE41 SSR 57.15 No other positions
BG75 SSR 57.9 No other positions