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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set alfalfa-MsSledge2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: alfalfa - MsSledge2005 [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 80.25 cM
Features by Type:
42 SSR
42 Total

Map Features

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Items 1 to 25 of 42.       of 2 | Next
alfalfa - MsSledge2005 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BI93 SSR 1.56 No other positions
Mt1F11 SSR 0 No other positions
BI75 SSR 8.41 No other positions
AL89 SSR 14.05 No other positions
AW289 SSR 23.91 No other positions
BF102 SSR 32.75 No other positions
BI96 SSR 38 No other positions
Mt2A03 SSR 40.64 No other positions
BF71 SSR 43.65 No other positions
Mt1B12 SSR 46.34 No other positions
AW99 SSR 47.1 No other positions
BI10 SSR 52.82 No other positions
AW04 SSR 54.58 No other positions
BG166 SSR 55.17 No other positions
MTIC347 SSR 55.17 alfalfa - MsJulier2003 - 4.3 MTIC347 SSR 42.85 (cM) Automated name-based, Automated name-based View Maps
AW285 SSR 55.24 No other positions
AW81 SSR 57.92 No other positions
AW249 SSR 58.81 alfalfa - MsSledge2005 - 8 AW249 SSR 70.54 (cM) Automated name-based View Maps
AW347 SSR 65.15 No other positions
Mt1H10(2) SSR 67.74 No other positions
Mt1H10 SSR 69.7 No other positions
BF184 SSR 80.25 No other positions
MTBB53G03F1 SSR 4.37 No other positions
Mt1G05 SSR 10.21 No other positions
BG83 SSR 17.7 No other positions