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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-PvMcCleanNDSU2007
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
dCAPS
RAPD
RFLP
SCAR
size-indel
SNAP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvMcCleanNDSU2007 [ View Map Set Info ]
Map Name: 8
Map Start: 0 cM
Map Stop: 209 cM
Features by Type:
20 CAPS
4 RAPD
5 RFLP
1 SCAR
1 SNAP
1 SSR
2 STS
9 dCAPS
6 size-indel
49 Total

Map Features

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Items 1 to 25 of 49.       of 2 | Next
common bean - PvMcCleanNDSU2007 - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
g1539 CAPS 85 No other positions
DROD3c RAPD 0 No other positions
g440 dCAPS 86 No other positions
Bng205 RFLP 86 common bean - BAT93_x_JALOEEP558_b - B08 Bng205 RFLP 64.25 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - A2 Bng205_1 RFLP 149.1 (cM) Automated name-based, Automated name-based View Maps
D1505 RFLP 86 - 87 common bean - BAT93_x_JALOEEP558_b - B08 D1505 RFLP 62.53 (cM) Automated name-based, Automated name-based View Maps
g1758 dCAPS 87 No other positions
g2514 size-indel 91 No other positions
g140 size-indel 100 No other positions
DROS3a RAPD 100 - 121 No other positions
DROC18b RAPD 121 No other positions
DROAD19b RAPD 121 - 134 No other positions
g580 CAPS 134 No other positions
g1084 CAPS 16 No other positions
g1588 dCAPS 16 - 19 No other positions
g1786 CAPS 19 No other positions
g2311 CAPS 28 No other positions
g135 size-indel 30 No other positions
g89 size-indel 30 - 34 No other positions
g2393 CAPS 34 No other positions
g1879 CAPS 39 No other positions
g1119 CAPS 46 No other positions
Gy-W17S STS 47 No other positions
A1CAO size-indel 140 No other positions
g1181 SNAP 148 No other positions
g2264 CAPS 148 - 166 No other positions